FastQCFastQC Report
Thu 22 Feb 2018
metage-DNA.illumina.azollafiliculoides.galgw2017.E.1.trimmed_paired.R2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenamemetage-DNA.illumina.azollafiliculoides.galgw2017.E.1.trimmed_paired.R2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10613642
Sequences flagged as poor quality0
Sequence length36-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCCCC21550.00133424078.109504145
TGTCCCC37109.87014E-46.1236587145
Produced by FastQC (version 0.11.3)