Post: Hello world!
After probably a year of pushing this forward, I finally am finishing my personal website!
Laura Dijkhuizen
PhD candidate at Utrecht University. Working on plant biology & metagenomics of Azolla ferns and their symbiosis with cyanobacteria
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Browsing the contigs of the Azolla genus-wide metagenome
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Azolla genus-wide metagenome taxonomy browser For my project on the Azolla genus-wide metagenome, I wanted to simultaneously visualise many metagenome assem...
My notes on processing nanopore data
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In this post, I document the Azolla lab protocol for nanopore DNA metagenomics sequencing.
Our humble lab server: what’s inside and how to use it.
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In this post, I document our lab server, how it’s made, what’s inside, and how to use it. We have used this machine for bioinformatic analyses in Azolla lab ...
Counting matches per read in a bam file
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Usecase A while back, we ran into this issue where we would like to select long PacBio RSII reads from a bam file based on the number of matching nucleotides...